Comparative Analysis of the Kinetic Properties of Peroxidases from two Improved Sorghum Varieties

doi.org/10.26538/tjnpr/v5i7.21

Authors

  • Chukwudi I. Nnamchi Department of Microbiology, University of Nigeria, Nsukka, Nigeria
  • Bartholomew N. Okolo Department of Microbiology, University of Nigeria, Nsukka, Nigeria
  • Anene N. Moneke Department of Microbiology, University of Nigeria, Nsukka, Nigeria
  • Bennett C. Nwanguma Department of Biochemistry, University of Nigeria, Nsukka, Nigeria
  • Chioma Amadi Department of Microbiology, University of Nigeria, Nsukka, Nigeria
  • Igor Efimov Department of Chemistry, University of Leicester, Lancaster Road, Leicester LE1 9HN, UK

Keywords:

Cereal enzymes, Enzymes and catalysis, Food and brewing chemistry, Protein purification, Sorghum and cereals, Sorghum peroxidase

Abstract

Varietal differences and their influence are not often critically considered when assessing properties of industrially important enzymes such as peroxidases, from cereals. Therefore, this study aims at closing that knowledge gap, by purifying peroxidases from two improved sorghum varieties, KSV8 and SK5912, which are food and brewery-grade grains used extensively all over the world. This was done via (NH4)2SO4 precipitation, ion exchange chromatography and gel filtration, and comparing their properties. Both KSV8 and SK5912 peroxidases had their soret peaks at 402 nm but with different extinction coefficients (ε 402 = 113 mm-1 cm -1 for KSV8 and ε402 = 119 mm-1 cm -1 for SK5912; while their molecular weights using ESI mass spectral data were 35.591 and 35.645 kDa, respectively. Optimum activity pH for KSV8 were pH 5 (guaiacol and o-dianisidine) and pH 4 for ABTS, pyrogallol pH 8, while for SK5912, they were pH 5 (guaiacol) and pH 4 (o-dianisidine, ABTS and pyrogallol). Optimum temperatures when measured with guaiacol were 50oC with KSV8 and 40oC for SK5912. Steady state kinetics of the enzymes with the same organic compounds showed that they have different affinities for them with o-dianisidine being the most efficiently oxidized substrate. Calcium greatly increased the activities of both sorghum peroxidases; however, the rate was much higher in SK5912 than in KSV8, while with ferric ion, the opposite obtained. Such differences or similarities were replicated across several other properties studied. These findings underline the great importance of differences in cereal varieties which should be reflected in their different biotechnological applications.

References

Serna-Saldivar SO. Cereal grains: properties, processing, and nutritional attributes. Boca Raton: CRC Press, Taylor and Francis Group; 2010. 1 p.

Borrell AK, Mullet JE, George-Jaeggli B, van Oosterom EJ, Hammer GL, Klein PE, Jordan DR. Drought adaptation of stay-green cereals associated with canopy development, leaf anatomy, root growth and water uptake. J Exp Bot. 2014; 65(21):6251-6263.

Krupa KN, Ningaraj D, Shashidhar HE, Harinikumar KM, Manojkumar HB, Subhash B, Vinayak T. Mechanisms of drought tolerance in sorghum: a review. Int J Pure Appl Biosci. 2017; 5(4):221-237.

Arendt EK and Zannini E. Sorghum. Cereal grains for the food and beverage industries. Cambridge: Woodhead Publishing Series in Food Science, Technology and Nutrition. 2013; 283-311p.

Aba DA, Abu E, Chindo PS, Marle PS, Maigida DN, Ogungbile AO. Characterization of some released sorghum varieties for food and industrial utilization in Nigeria. Agric Trop Subtrop. 2005; 38(2):1-6.

Nnamchi CI, Okolo BN, Moneke AN. Grain and malt quality properties of some improved Nigerian sorghum varieties. J Inst Brew. 2014; 120(4):353-359.

Sissoko M, Smale M, Castiaux A, Theriault V. Adoption of new sorghum varieties in Mali through a participatory approach. Sustainability. 2019; 11(7):4780-4794.

Kent NL and Evers AD. Cereal crops: economics, statistics and uses. In: Kent NL, Evers AD (Eds.). Kent’s technology of cereals: an introduction for students of Food Sciences and Agriculture. Oxford: Pergamon; 1994.

Pontieri P, Mamone G, De Caro S, Tuinstra MR, Roemer E, Okot J, De Vita P, Fiocco DBM, Alifano P, Pignone D, Massardo DR, Del Giudice L. Sorghum, a healthy and gluten-free food for celiac patients as demonstrated by genome, biochemical and immunological analyses. J Agric Food Chem. 2013; 61(10):2565-2571.

Galassi E, Taddei F, Ciccoritti R, Nocente F, Gazza L. Biochemical and technological characterization of two C4 gluten-free cereals: Sorghum bicolor and Eragrostis tef. Cereal Chem. 2020; 97(1):65-73.

Nnamchi CI, Parkin G, Efimov I, Basran J, Kwon H, Svistunenko DA, Agirre J, Okolo BN, Moneke AN, Nwanguma BC, Moody PCE, Raven EL. Structural and spectroscopic characterisation of a heme peroxidase from sorghum. J Biol Inorg Chem. 2016; 21(1):63-70.

Caruso C, Chilosi G, Leonardi L, Bertini L, Margo P, Buonocore V, Caporate C. A basic peroxidase from wheat kernel with antifungal activity. Phytochem. 2001;58(5):743-750.

Nwanguma BC and Eze MO. Heat sensitivity, optimum pH and changes in activity of sorghum peroxidase during malting and mashing. J Inst Brew. 1995; 101(4):275-276.

Sae SW and Kadoum AM, Cunningham BA. Purification and some properties of sorghum grain esterase and peroxidase. Phytochem. 1971; 10(1):1-8.

Omidiji O, Okpuzor J, Otubu O. Peroxidase activity of germinating Sorghum bicolorgrains: effect of some cations. J Sci Food Agric. 2002; 82(15):1881-1885.

Dicko MH, Gruppen H, Hilhorst R, Voragen AGJ, van Berkel WJH. Biochemical characterization of the major sorghum grain peroxidase. FEBS J.2006; 273(10):2293-2307.

Ogbonna AC, Obi SKC, Okolo BN, Odibo FJC. Purification and some properties of a protease from sorghum malt variety KSV8-II. J Inst Brew. 2003;109(3):179-186.

Bradford MM. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 1976; 72(1-2):248-254.

Antonini M and Brunori E. Hemoglobin and myoglobin and their reactions with ligands. Amsterdam: North Holland Publishers; 1971.

Santimone M. Titration study of guaiacol oxidation by horseradish peroxidase. Can J Biochem. 1975; 53(6):649-657.

Wenk MR and Fernandis AZ. A Manual for biochemistry protocols. In: Jan-Thorsten S (Ed) Manuals in biomedical research (Vol. 3).Singapore: World Scientific Publishing Co Pte. Ltd, 2007. 21-27 p.

Badyal SK, Joyce MG, Sharp KH, Seward HE, Mewies M, Basran J, MacDonald IK, Moody PCE, Raven EL. Conformational mobility in the active site of a heme peroxidase. J Biol Chem. 2006; 281(34):4512-24520.

Suzuki T, Honda Y, Mukasa Y, Kim S. Characterization of peroxidase in buckwheat seed. Phytochemistry. 2006;67(3):219-224.

Bisswanger H. Practical Enzymology. Weinheim: Wiley- VCH Verlag GmbH and Co; 2004; 80p.

Efimov I, Papadopoulou ND, McLean KJ, Badyal SK, Macdonald IK, Munro AW, Moody PCE, Raven EL. The redox properties of ascorbate peroxidase. Biochem. 2007;46(27):8017-8023.

Massey V. A simple method for the determination of redox potentials. In: Curti, B, RonchiS, ZanettiG (Eds). Flavins and flavoproteins. New York: Walter de Gruyter and Co; 1990. 59-66 p.

Ederth J, Mandava CS, Dasgupta S, Sanyal S. A single step method for purification of active His-tagged ribosomes from a genetically engineered Escherichia coli. Nucleic Acids Res. 2009; 37(2):e15.

Hiraga S, Sasaki K, Ito H, Ohashi Y, Matsui H. A large family of class III plant peroxidases. Plant Cell Physiol. 2001; 42(5):462-468.

Dunford HB. Peroxidases and Catalases: biochemistry, biophysics, biotechnology and physiology (2nd Ed). Hoboken, New Jersey: John Wiley and Sons; 2010. 41 p.

Nnamchi CI. Purification and characterization of peroxidases from some Nigerian sorghum varieties. (Doctoral dissertation), University of Nigeria, Nsukka, (2014).

Battistuzzi G, Bellei M, Bortolotti CA, Di Rocco G, Leonardi A, Sola M. Characterization of the solution reactivity of a basic heme peroxidase from Cucumis sativus. Arch Biochem Biophys. 2004; 423(2):317-331.

Jones DK, Dalton DA, Rosell FI, Raven EL. Class I heme peroxidases: characterization of soybean ascorbate peroxidase. Arch Biochem Biophys. 1998; 360(2):173-178.

Rasmussen CB, Henriksen A, Abelskov AK, Jensen RB, Rasmussen SK, Hejgaard J. Purification, characterization and stability of barley grain peroxidase BP1, a new type of plant peroxidase. Plant Physiol. 1997; 100(1):102-110.

Bestwick CS, Brown IR, Mansfield JW. Localized changes in peroxidase activity accompany hydrogen peroxide generation during the development of a non-host hypersensitive reaction in lettuce. Plant Physiol. 1998;118(3):1067-1078.

Nielsen KL, Indiana C, Henriksen A, Feis A, Becucci M, Gajhede M, Smulevich G, Welinder KG. Differential activity and structure of high similar peroxidases: spectroscopic, crystallographic, and enzymatic analyses of lignifying Arabidopsis thaliana peroxidase A2 and horseradish peroxidase A2. Biochem. 2001; 40(37):1013-11021.

Zentgraf B and Ahern TJ. Practical importance of enzyme stability. Pure Appl Chem. 1991; 63(10):1527-1540.

Murphy EJ, Metcalfe CL, Nnamchi C, Moody PCE, Raven EL. Crystal structure of guaiacol and phenol bound to a heme peroxidase. FEBS J.2012; 279(9):1632-1639.

Siebel FP and Singruen E. Application of oxidationreduction potential to brewing control. Ind Eng Chem. 1935; 27(9):1042-1045.

Aron PM and Shellhammer TH. A discussion of polyphenols in beer physical and flavour stability. J Inst Brew. 2010; 116(4):369-380.

Thomson AJ and Gray HB. Bio-inorganic chemistry. Curr Opin Chem Biol. 1998; 2(2):155-158.

Waldron KJ and Robinson NJ. How do bacterial cells ensure that metalloproteins get the correct metal? Nat Rev Microbiol. 2009; 7(1):25-35.

Scrimgeour KG. Chemistry and control of enzyme reactions. London: Academic Press; 1977; 38-79p.

Penel C. The role of calcium in the control of peroxidase activity. In: Greppin H, Penel C, Gaspar T (Eds). Molecular and physiological aspects of plant peroxidases. Switzerland: University of Geneva; 1986; 155-164p.

Hepler PK, Wayne RO. Calcium and plant development. Annu Rev Plant Physiol. 1985; 36(1):397-439.

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Published

2021-07-01

How to Cite

Nnamchi, C. I., Okolo, B. N., Moneke, A. N., Nwanguma, B. C., Amadi, C., & Efimov, I. (2021). Comparative Analysis of the Kinetic Properties of Peroxidases from two Improved Sorghum Varieties: doi.org/10.26538/tjnpr/v5i7.21. Tropical Journal of Natural Product Research (TJNPR), 5(7), 1286–1294. Retrieved from https://www.tjnpr.org/index.php/home/article/view/527